Automated multi-atlas whole-brain microscopy registration
Adam Tyson, Charly Rousseau, Stephen Lenzi +1 more
Exports label images to 3D-printable stl files.
Johannes Soltwedel
Fixed cut
Sean Martin
Spectral analysis, simulation and subtomogram averaging of heterogenic cylindrical structures
Hanjin Liu
A plugin that allows you to run macros on the images for any kind of image processing.
Jaison John
Locate bacteria in CLSM obtained infected bone tissue images
Shibarjun Mandal
Plugin for cell segmentation in 3D
Import Trackmate XML files for Track Visualization and analysis in Napari.
Varun Kapoor, Mari Tolonen, Jakub Sedzinski
Bacterial segmentation and analysis platform than can inport/export files in multiple formats. Integrating many tools such as Cellpose, ColiCoords, Oufti/MicrobeTracker.